Publications

2024

1. Workshop

   Assessing data quality on fetal brain MRI reconstruction: a multi-site and multi-rater study

   Thomas Sanchez, Angeline Mihailov, Yvan Gomez, and 7 more authors

   MICCAI 2024 Workshop on Perinatal, Preterm and Paediatric Image Analysis, 2024

   Bib PDF

   @article{sanchez2024assessing,
     title = {Assessing data quality on fetal brain MRI reconstruction: a multi-site and multi-rater study},
     author = {Sanchez, Thomas and Mihailov, Angeline and Gomez, Yvan and Mart{\'\i}-Juan, Gerard and Eixarch, Elisenda and Jakab, Andr{\'a}s and Dunet, Vincent and Koob, M{\'e}riam and Auzias, Guillaume and Bach Cuadra, Meritxell},
     journal = {MICCAI 2024 Workshop on Perinatal, Preterm and Paediatric Image Analysis},
     year = {2024},
   }

2. Conference

   Improving cross-domain brain tissue segmentation in fetal MRI with synthetic data

   Vladyslav Zalevskyi, Thomas Sanchez, Margaux Roulet, and 4 more authors

   Medical Image Computing and Computer Assisted Intervention–MICCAI 2024: 27th International Conference, 2024

   Bib PDF Code

   @article{zalevskyi2024improving,
     title = {Improving cross-domain brain tissue segmentation in fetal MRI with synthetic data},
     author = {Zalevskyi, Vladyslav and Sanchez, Thomas and Roulet, Margaux and Verddera, Jordina Aviles and Hutter, Jana and Kebiri, Hamza and Cuadra, Meritxell Bach},
     journal = {Medical Image Computing and Computer Assisted Intervention--MICCAI 2024: 27th International Conference},
     year = {2024}
   }

3. Journal

   FetMRQC: A robust quality control system for multi-centric fetal brain MRI

   Thomas Sanchez, Oscar Esteban, Yvan Gomez, and 8 more authors

   Medical Image Analysis, 2024

   Bib PDF Code

   @article{sanchez2024fetmrqc,
     title = {FetMRQC: A robust quality control system for multi-centric fetal brain MRI},
     author = {Sanchez, Thomas and Esteban, Oscar and Gomez, Yvan and Pron, Alexandre and Koob, M{\'e}riam and Dunet, Vincent and Girard, Nadine and Jakab, Andras and Eixarch, Elisenda and Auzias, Guillaume and others},
     journal = {Medical Image Analysis},
     pages = {103282},
     year = {2024},
     publisher = {Elsevier},
   }

4. Journal

   Assessment of fetal corpus callosum biometry by 3D super-resolution reconstructed T2-weighted magnetic resonance imaging

   Samuel Lamon, Priscille de Dumast, Thomas Sanchez, and 5 more authors

   Frontiers in Neurology, 2024

   Bib PDF

   @article{lamon2024assessment,
     title = {Assessment of fetal corpus callosum biometry by 3D super-resolution reconstructed T2-weighted magnetic resonance imaging},
     author = {Lamon, Samuel and {de Dumast}, Priscille and Sanchez, Thomas and Dunet, Vincent and Pomar, L{\'e}o and Vial, Yvan and Koob, M{\'e}riam and Bach Cuadra, Meritxell},
     journal = {Frontiers in Neurology},
     volume = {15},
     pages = {1358741},
     year = {2024},
     publisher = {Frontiers Media SA}
   }

2023

1. Workshop

   FetMRQC: Automated Quality Control for fetal brain MRI

   Thomas Sanchez, Oscar Esteban, Yvan Gomez, and 2 more authors

   MICCAI 2023 Workshop on Perinatal, Preterm and Paediatric Image Analysis, 2023

   Bib PDF Code

   @article{sanchez2023fetmrqc,
     title = {FetMRQC: Automated Quality Control for fetal brain MRI},
     author = {Sanchez, Thomas and Esteban, Oscar and Gomez, Yvan and Eixarch, Elisenda and Cuadra, Meritxell Bach},
     journal = {MICCAI 2023 Workshop on Perinatal, Preterm and Paediatric Image Analysis},
     pages = {3-16},
     year = {2023}
   }

2. Conference

   Simulation-based parameter optimization for fetal brain MRI super-resolution reconstruction

   Priscille de Dumast*, Thomas Sanchez*, Hélène Lajous, and 1 more author

   In Medical Image Computing and Computer Assisted Intervention–MICCAI 2023: 26th International Conference, 2023

   Bib PDF

   @inproceedings{de2022simulation,
     title = {Simulation-based parameter optimization for fetal brain MRI super-resolution reconstruction},
     author = {{de Dumast}*, Priscille and Sanchez*, Thomas and Lajous, H{\'e}l{\`e}ne and Cuadra, Meritxell Bach},
     booktitle = {Medical Image Computing and Computer Assisted Intervention--MICCAI 2023: 26th International Conference},
     year = {2023},
   }

3. Abstract

   Q’kay: a manager for the quality assessment of large neuroimaging studies

   Elodie Savary, Céline Provins, Thomas Sanchez, and 1 more author

   2023

   Bib

   @misc{savary_provins_sanchez_esteban_2023,
     title = {Q’kay: a manager for the quality assessment of large neuroimaging studies},
     url = {osf.io/edx6t},
     doi = {10.31219/osf.io/edx6t},
     publisher = {OSF Preprints},
     author = {Savary, Elodie and Provins, Céline and Sanchez, Thomas and Esteban, Oscar},
     year = {2023}
   }

2022

1. Thesis

   Learning to sample in Cartesian MRI

   Thomas Sanchez

   2022

   Bib PDF Code

   @article{sanchez2022learning,
     title = {Learning to sample in Cartesian MRI},
     author = {Sanchez, Thomas},
     institution = {IEM},
     publisher = {EPFL},
     address = {Lausanne},
     pages = {192},
     year = {2022},
     url = {http://infoscience.epfl.ch/record/294077},
     doi = {10.5075/epfl-thesis-9981},
   }

2021

1. Preprint

   On the benefits of deep RL in accelerated MRI sampling

   Thomas Sanchez*, Igor Krawczuk*, and Volkan Cevher

   2021

   Bib PDF

   @misc{sanchez2021on,
     author = {Sanchez*, Thomas and Krawczuk*, Igor and Cevher, Volkan},
     title = {On the benefits of deep RL in accelerated MRI sampling},
     year = {2021},
   }

2. Conference

   A Plug-and-Play Deep Image Prior

   Zhaodong Sun, Fabian Latorre, Thomas Sanchez, and 1 more author

   In ICASSP, 2021

   Bib PDF

   @inproceedings{sun2021a,
     author = {Sun, Zhaodong and Latorre, Fabian and Sanchez, Thomas and Cevher, Volkan},
     booktitle = {ICASSP},
     title = {A Plug-and-Play Deep Image Prior},
     year = {2021},
     volume = {},
     number = {},
     pages = {8103-8107},
     doi = {10.1109/ICASSP39728.2021.9414879},
   }

2020

1. Workshop

   Uncertainty-Driven Adaptive Sampling via GANs

   Thomas Sanchez, Igor Krawczuk, Zhaodong Sun, and 1 more author

   In NeurIPS 2020 Workshop on Deep Learning and Inverse Problems, 2020

   Bib PDF

   @inproceedings{sanchez2020uncertaintydriven,
     title = {Uncertainty-Driven Adaptive Sampling via {GAN}s},
     author = {Sanchez, Thomas and Krawczuk, Igor and Sun, Zhaodong and Cevher, Volkan},
     booktitle = {NeurIPS 2020 Workshop on Deep Learning and Inverse Problems},
     year = {2020},
   }

2. Preprint

   Closed loop deep Bayesian inversion: Uncertainty driven acquisition for fast MRI

   Thomas Sanchez, Igor Krawczuk, Zhaodong Sun, and 1 more author

   2020

   Bib PDF

   @misc{sanchez2020closed,
     title = {Closed loop deep Bayesian inversion:  Uncertainty driven acquisition for fast {MRI}},
     author = {Sanchez, Thomas and Krawczuk, Igor and Sun, Zhaodong and Cevher, Volkan},
     year = {2020},
   }

3. Conference

   Scalable Learning-Based Sampling Optimization for Compressive Dynamic MRI

   Thomas Sanchez, Baran Gözcü, Ruud B. Heeswijk, and 4 more authors

   In ICASSP, 2020

   Bib PDF

   @inproceedings{sanchez2020scalable,
     author = {Sanchez, Thomas and Gözcü, Baran and van Heeswijk, Ruud B. and Eftekhari, Armin and Ilıcak, Efe and Çukur, Tolga and Cevher, Volkan},
     booktitle = {ICASSP},
     title = {Scalable Learning-Based Sampling Optimization for Compressive Dynamic MRI},
     year = {2020},
     volume = {},
     number = {},
     pages = {8584-8588},
     doi = {10.1109/ICASSP40776.2020.9053345},
   }

2019

1. Conference

   Rethinking Sampling in Parallel MRI: A Data-Driven Approach

   Baran Gözcü, Thomas Sanchez, and Volkan Cevher

   In 27th European Signal Processing Conference (EUSIPCO), 2019

   Bib PDF

   @inproceedings{gozcu2019rethinking,
     title = {Rethinking Sampling in Parallel {MRI}: A Data-Driven Approach},
     author = {G{\"o}zc{\"u}, Baran and Sanchez, Thomas and Cevher, Volkan},
     booktitle = {27th European Signal Processing Conference (EUSIPCO)},
     year = {2019},
   }